A Regime-Aware Trajectory Prediction Framework for 1000+ Systems Biology Models
heng rao · Jason Z Zhang · Yu Gu · Zhenghao Liu · Ge Yu · Jeffrey Su · Yang Cao · Fan Yang · Minghan Chen
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heng rao · Jason Z Zhang · Yu Gu · Zhenghao Liu · Ge Yu · Jeffrey Su · Yang Cao · Fan Yang · Minghan Chen
Shaohua Duan · Pengcheng Huang · Xinze Li · Zhenghao Liu · Xiaoyuan Yi · Yukun Yan · Shuo Wang · Yu Gu · Ge Yu · Maosong Sun
Long-context modeling is critical for a wide range of real-world tasks, including long-context question answering, summarization, and complex reasoning tasks. Recent studies have explored fine-tuning Large Language Models (LLMs) with synthetic data to enhance their long-context capabilities. Howe...
Yifan Ji · Zhipeng Xu · Zhenghao Liu · Zulong Chen · Qian Zhang · ZhiBo Yang · Junyang Lin · Yu Gu · Ge Yu · Maosong Sun
Key Information Extraction (KIE) from real-world documents remains challenging due to substantial variations in layout structures, visual quality, and task-specific information requirements. Recent Large Multimodal Models (LMMs) have shown promising potential for performing end-to-end KIE directl...
Fan Li · Yu Gu · Zhigang Wang · Fangling Leng · Zhenghao Liu · Ge Yu
Diffusion language models (DLMs) have emerged as a powerful non-autoregressive alternative to GPT-style sequential generation, but suffer from substantial computational overhead due to their iterative parallel denoising. Existing acceleration works cannot accurately detect semantically stabilized...
Zhenghao Liu · Zhuoyang Wu · Xinze Li · Yukun Yan · Shuo Wang · Zulong Chen · Yu Gu · Ge Yu · Maosong Sun
Large Language Models (LLMs) have demonstrated remarkable reasoning capabilities, particularly in solving complex mathematical problems. Recent studies show that distilling long reasoning trajectories can effectively enhance the reasoning performance of small-scale student models. However, teache...
Shuliang Liu · Zhipeng Xu · Zhenghao Liu · Yukun Yan · Minghe Yu · Yu Gu · an Jiaotong University) · Huiyuan Xie · Ge Yu
Large Language Models (LLMs) as automatic evaluators, commonly referred to as LLM-as-a-Judge, have also attracted growing attention. This approach plays a vital role in aligning LLMs with human judgments, providing accurate and reliable assessments. However, LLM-based judgment models often exhibi...
Zhuoyang Wu · Xinze Li · Zhenghao Liu · Yukun Yan · Zhiyuan Liu · Minghe Yu · Cheng Yang · Yu Gu · Ge Yu · Maosong Sun
Large Language Models (LLMs) have exhibited strong reasoning capabilities and achieved remarkable performance in mathematical problem-solving tasks. Recently, distilling reasoning ability from long-form Chains-of-Thought (CoTs) has emerged as a promising approach for enhancing Small Language Mode...
He Wang · Yu Gu · Fangfang Li · Zhigang Wang · Zhenghao Liu · Ning Wang · Xiaohua Li · Ge Yu
The autoregressive inference in large language models requires repeated computation across transformer layers. While caching intermediate key-value (KV) pairs eliminates redundancy, it introduces severe memory overhead, particularly in long-context settings. Most existing cache compression method...
Haidong Xin · Xinze Li · Zhenghao Liu · Yukun Yan · Shuo Wang · Cheng Yang · Yu Gu · Ge Yu · Maosong Sun
Existing memory systems enable Large Language Models (LLMs) to support long-horizon human-LLM interactions by persisting historical interactions beyond limited context windows. However, while recent approaches have succeeded in constructing effective memories, they often disrupt the inherent logi...
Xin Dai · Pengcheng Huang · Zhenghao Liu · Shuo Wang · Yukun Yan · Chaojun Xiao · Yu Gu · Ge Yu · Maosong Sun
Masked diffusion models (MDMs), which leverage bidirectional attention and a denoising process, are narrowing the performance gap with autoregressive models (ARMs). However, their internal attention mechanisms remain under-explored. This paper investigates the attention behaviors in MDMs, reveali...
Yuqi Xiong · Chunyi Peng · Zhipeng Xu · Zhenghao Liu · Zulong Chen · Yukun Yan · Shuo Wang · Yu Gu · Ge Yu
Visual Retrieval-Augmented Generation (VRAG) enhances Vision-Language Models (VLMs) by incorporating external visual documents to address a given query. Existing VRAG frameworks usually depend on rigid, pre-defined external tools to extend the perceptual capabilities of VLMs, typically by explici...
Hao Yang · Yifan Ji · Zhipeng Xu · Zhenghao Liu · Yukun Yan · Zulong Chen · Shuo Wang · Yu Gu · Ge Yu
Visual document retrieval aims to retrieve a set of document pages relevant to a query from visually rich collections. Existing methods often employ Vision-Language Models (VLMs) to encode queries and visual pages into a shared embedding space, which is then optimized via contrastive training. Ho...
Chunyi Peng · Zhipeng Xu · Zhenghao Liu · Yishan Li · Yukun Yan · Shuo Wang · Yu Gu · Minghe Yu · Ge Yu · Maosong Sun
Multimodal Retrieval-Augmented Generation (MRAG) has shown promise in mitigating hallucinations in Multimodal Large Language Models (MLLMs) by incorporating external knowledge. However, existing methods typically adhere to rigid retrieval paradigms by mimicking fixed retrieval trajectories and th...
Mingyi Cao · Chunyu Cao · Yanfeng Zhang · Zhenbo Fu · Xin Ai · Qiange Wang · Yu Gu · Ge Yu
Qian Ma · Linfei Dai · Zhongming Yao · Yu Gu · TIANYI LI · Christian S. Jensen · Ge Yu
Haidong Xin · Zhenghao Liu · Sen Mei · Yukun Yan · Shi Yu · Shuo Wang · Zulong Chen · Yu Gu · Ge Yu · Chenyan Xiong
Qiuyang Li · Qian Ma · Zhongming Yao · Shikai Guo · Yu Gu · Ge Yu · TIANYI LI